2026
Dual functions of apigenin in suppressing Phytophthora capsici and shaping the pepper microbiome
DOI 10.1186/s40168-026-02386-w
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2026
Steering root-associated microbiomes via direct and soil legacy effects of neighbors
DOI 10.1186/s40168-026-02429-2
2026
Curcumin modulates hepatic pyroptosis-autophagy crosstalk induced by aflatoxin B1 via rumen microbiota-blood-liver axis
DOI 10.1186/s40168-026-02396-8
2025
Species turnover within cystic fibrosis lung microbiota is indicative of acute pulmonary exacerbation onset
DOI 10.1186/s40168-025-02143-5
2025
Unveiling essential host genes and keystone microorganisms of the olive tree holobiont linked to Verticillium wilt tolerance
DOI 10.1186/s40168-025-02216-5
2025
ProFiT-SPEci-FISH: a novel approach for linking plasmids to hosts in complex microbial communities at the single-cell level
DOI 10.1186/s40168-025-02238-z
2023
Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory
DOI 10.1186/s40168-023-01571-5
2023
Correction: Sodium levels and grazing pressure shape natural communities of the intracellular pathogen Legionella
DOI 10.1186/s40168-023-01639-2
2022
Gut microbiome of helminth-infected indigenous Malaysians is context dependent
DOI 10.1186/s40168-022-01385-x
2022
Early life inter-kingdom interactions shape the immunological environment of the airways
DOI 10.1186/s40168-021-01201-y
2021
Synergistic action of the gut microbiota in environmental RNA interference in a leaf beetle
DOI 10.1186/s40168-021-01066-1
2021
Metal(loid) speciation and transformation by aerobic methanotrophs
DOI 10.1186/s40168-021-01112-y
2021
Comment on “Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection” by A.N. Zhang et al.
DOI 10.1186/s40168-020-00950-6
2021
Correction to: Depletion of acetate-producing bacteria from the gut microbiota facilitates cognitive impairment through the gut-brain neural mechanism in diabetic mice
DOI 10.1186/s40168-021-01127-5
2020
The influence of spaceflight on the astronaut salivary microbiome and the search for a microbiome biomarker for viral reactivation
DOI 10.1186/s40168-020-00830-z
2020
MICHELINdb: a web-based tool for mining of helminth-microbiota interaction datasets, and a meta-analysis of current research
DOI 10.1186/s40168-019-0782-7
2020
Correction to: Hill-based dissimilarity indices and null models for analysis of microbial community assembly
DOI 10.1186/s40168-020-00942-6
2019
Trait-based analysis of the human skin microbiome
DOI 10.1186/s40168-019-0698-2
2018
Dynamic linear models guide design and analysis of microbiota studies within artificial human guts
DOI 10.1186/s40168-018-0584-3
2018
Host contributes to longitudinal diversity of fecal microbiota in swine selected for lean growth
DOI 10.1186/s40168-017-0384-1
2017
A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform
DOI 10.1186/s40168-017-0279-1
2017
Identification of 76 novel B1 metallo-β-lactamases through large-scale screening of genomic and metagenomic data
DOI 10.1186/s40168-017-0353-8
2016
Research on the human virome: where are we and what is next
DOI 10.1186/s40168-016-0177-y
2016
ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses
DOI 10.1186/s40168-016-0153-6
2015
Context and the human microbiome
DOI 10.1186/s40168-015-0117-2
2014
Comparison of brush and biopsy sampling methods of the ileal pouch for assessment of mucosa-associated microbiota of human subjects
DOI 10.1186/2049-2618-2-5
2014
A straightforward and efficient analytical pipeline for metaproteome characterization
DOI 10.1186/preaccept-1406008234136429